EGAF00005317919 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317919
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3366145
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	16351	0.48574853430259246	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	15450	0.4589820105788669	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	15325	0.45526856389133563	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	12985	0.38575284190074993	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	12032	0.3574415243550115	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7046	0.20931956288276354	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4862	0.1444382223582169	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	3919	0.11642398054748086	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3461	0.10281791188436624	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	3419	0.10157019379735573	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	3460	62.61706	4
TCTACGG	3470	62.337975	5
CTACGGC	3595	60.07524	6
TACGGCC	3570	60.01836	7
ACGGCCA	3880	55.311295	8
CGGCCAT	3930	54.520496	9
GGGTCTA	2930	54.43321	2
GCGTCTA	805	53.99499	2
GCCATAC	4000	53.644756	11
GCGCGGT	7465	52.911976	9
CATACCA	4095	52.32136	13
CCATACC	4140	52.000664	12
CCGAACT	1155	50.73235	67
GGCCATA	4260	50.61846	10
CGCGGTG	7955	49.652786	10
TGGCGCG	7995	49.485565	15
TACCACC	4465	48.52007	15
CGTCTAC	995	48.499992	3
ATACCAC	4485	48.380013	14
GCCGGTT	1170	47.973743	3