EGAF00005317927 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317927
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3135808
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	17443	0.5562521685001123	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	7788	0.24835704226789396	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6263	0.1997252382798947	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5941	0.18945675245423188	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	3711	0.11834270465538707	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3458	0.11027460864950916	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	3540	50.002934	9
TGGCGCG	3785	46.67008	15
CGCGGTG	3845	46.305206	10
GGGGACT	4100	45.147804	1
GGACTCT	4365	44.17645	3
TCTGGTC	4235	44.155216	10
ACTCTTC	4300	44.127754	5
GGGACTC	4495	41.673145	2
TTCTGGT	4590	41.115303	9
GACTCTT	4815	41.05294	4
CTGGTCC	4560	40.848007	11
CTACTCG	4440	40.580532	37
TACTCGG	4470	40.24348	38
CGGGACT	960	39.284565	1
GTAGTCC	4610	39.274605	27
CGCGTGC	4625	38.808	18
GGCGCGT	4645	38.54825	16
GCCGGTT	590	38.519352	3
TAGTCCC	4750	38.280933	28
CGGTTCA	585	38.26363	5