EGAF00005317929 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317929
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3115218
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	17395	0.5583878881028551	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	7574	0.24312905228462342	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6045	0.19404741498026784	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5948	0.1909336682055638	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	3753	0.12047310974705464	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3395	0.10898113711464175	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	3490	50.01569	9
CGCGGTG	3710	47.3282	10
TGGCGCG	3730	46.981373	15
GGGGACT	4560	46.57559	1
TCTGGTC	4550	46.006153	10
GGACTCT	4725	45.69181	3
ACTCTTC	4625	45.4141	5
GGGACTC	4980	43.99284	2
TTCTGGT	4840	43.67639	9
CCGAACT	540	43.53078	67
GACTCTT	5130	42.08456	4
CTGGTCC	4950	42.01027	11
CGGGACT	1105	41.387993	1
CTACTCG	4400	40.46832	37
TACTCGG	4410	40.312874	38
TCTTCTG	5375	39.84342	7
TGGTCCC	5235	39.788303	12
CGGCAAC	580	39.42563	1
GGCGCGT	4480	39.423584	16
CGCGTGC	4520	39.016098	18