EGAF00005317933 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317933
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3102871
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	15767	0.508142297891211	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	7462	0.24048695546801654	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	5921	0.19082327302681934	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5514	0.17770638869614624	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	3521	0.1134755521579853	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3257	0.10496730286241356	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	3635	51.70248	9
CGCGGTG	3740	50.25094	10
TGGCGCG	3875	48.49634	15
ACTCTTC	4155	46.39243	5
GCCGGTT	610	45.137154	3
GGACTCT	4425	44.48942	3
TCTGGTC	4295	44.398647	10
GGGGACT	4230	43.96268	1
CGGGACT	1115	43.56251	1
CTACTCG	4350	43.332912	37
TACTCGG	4425	42.69916	38
CCGAACT	645	42.525852	67
GGGACTC	4555	42.169357	2
GACTCTT	4780	41.833313	4
GGCGCGT	4545	41.72321	16
TTCTGGT	4600	41.305164	9
CTGGTCC	4615	41.021744	11
GTAGTCC	4615	40.8673	27
CGTGCCT	4655	40.56591	20
ACTCGGG	4680	40.390377	39