EGAF00005317940 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317940
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3205585
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	14767	0.46066474606039143	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	5172	0.16134340533787125	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	4374	0.1364493532381765	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	3762	0.11735767418427526	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGCCGG	4340	35.344616	48
CGCGGCA	4580	35.272873	32
GCGGCAC	4765	34.273335	33
CCCGTCG	4520	33.904026	44
ACCCGCG	4900	33.272736	25
CCGTCGC	4630	33.030056	45
CGGCACC	5045	32.09917	34
CCCCCGA	5335	30.58889	19
AGGAGGG	7385	29.986147	70
CCGCGCG	5485	29.922203	27
GCACCCC	5435	29.80517	36
CCCCGAC	5460	29.76866	20
CCCGCGC	5545	29.469126	26
TAGTCCG	265	28.74724	6
CACCCCC	5740	28.593784	37
CCCCCGT	5455	28.401321	42
CGTCGCC	5485	28.013647	46
GTCGCCG	5545	27.780785	47
GCGCGGG	5590	27.352074	62
CCCGACC	6160	26.44708	21