FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005317952

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005317952
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4103785
Sequences flagged as poor quality0
Sequence length35-76
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG292350.7123911218545805No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG93610.2281064919336661No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN88430.21548399830887827No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG80400.19591669641562606No Hit
GGGGGCAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG56910.13867685563449353No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)