EGAF00005317955 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317955
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4217071
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	10357	0.2455970032280699	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	8917	0.21145007992514234	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	7174	0.17011807484389047	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	5225	0.12390116267902533	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	4970	49.76098	9
TGGCGCG	5225	47.71664	15
CGCGGTG	5470	45.40081	10
CCGAACT	810	43.919155	67
CTACTCG	6140	41.345276	37
TACTCGG	6160	41.295128	38
GTAGTCC	6380	39.38813	27
ACTCGGG	6555	39.089127	39
TAGTCCC	6455	38.94628	28
CGTGCCT	6420	38.942593	20
TGTAGTC	6620	37.94432	26
CGAACTT	1000	37.375008	68
GCGTGCC	6755	37.04826	19
GGCGCGT	6830	36.756554	16
AGGATCG	6610	36.744606	59
GCCGGTT	975	36.73302	3
CCTGTAG	6960	36.01316	24
GATCGCT	6775	35.748135	61
CGGTTCA	975	35.673412	5
CGGGTAG	690	35.54734	1