EGAF00005317973 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317973
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3029722
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6477	0.2137819905588698	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	4963	0.16381040900782315	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	4085	0.13483085246765214	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3631	0.11984597926806485	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	2580	45.937637	9
TGGCGCG	2680	43.965717	15
CCGAACT	545	39.4915	67
CGGTAAG	305	37.32296	1
CTACTCG	3160	37.192806	37
CGGCAAT	335	37.06975	1
TACTCGG	3165	37.04492	38
CGCGGTG	3220	37.02055	10
CGGTTCA	595	36.37535	5
GCCGGTT	590	35.51788	3
CGGCATA	245	35.199455	1
GTAGTCC	3390	35.09959	27
GTACGCA	440	34.797695	65
GGGGTAT	1240	34.495464	1
TAGTCCC	3505	34.062202	28
CGGCAAA	630	33.947918	1
ACTCGGG	3590	33.738045	39
AGTACGC	520	33.506157	64
TGTAGTC	3580	33.22076	26
AGGATCG	3525	33.18479	59