EGAF00005317975 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317975
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3509585
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	62

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	36909	1.0516628034368736	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	27674	0.7885262787480571	No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA	8250	0.2350705282818339	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7930	0.2259526411242355	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	6622	0.188683277367552	No Hit
GGGGGGCCCTTCCCGTGGATCGCCCCAGCTGCGGCGGGCGTCGCGGCCGC	6483	0.1847226951334702	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5249	0.14956184278198134	No Hit
GGGGGGCCACGGCAAGAAGGTGGCCGACGCGCTGACCAACGCCGTGGCGC	5135	0.1463135954820869	No Hit
GGGGGGCACCTTTGCCACACTGAGTGAGCTGCACTGTGACAAGCTGCACG	4771	0.13594199884031874	No Hit
GGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	4756	0.1355145978798063	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4511	0.12853371552477003	No Hit
GGGGGTTAAGGGCCACGGCAAGAAGGTGGCCGACGCGCTGACCAACGCCG	4207	0.11987172272505155	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3748	0.10679325333337134	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	3589	0.10226280315193961	No Hit
GGGGGACAACCTCAAGGGCACCTTTGCCACACTGAGTGAGCTGCACTGTG	3539	0.10083813328356486	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGGGACT	6390	55.737183	1
ACTCTTC	7990	54.631638	5
GACTCTT	8110	53.865067	4
GGACTCT	7950	53.802013	3
TCTGGTC	8030	53.30362	10
TCTTCTG	8200	52.404438	7
CTCTTCT	8360	52.132652	6
TTCTGGT	8230	52.089878	9
GGGACTC	7840	51.96455	2
GCGCGGT	3110	51.21535	9
CTGGTCC	8475	49.98566	11
CGGGACT	1655	49.741238	1
TGGTCCC	8660	48.917843	12
CGCGGTG	3460	46.23116	10
CCGAACT	530	46.10979	67
TGGCGCG	3590	44.934654	15
CGGTTCA	540	44.559437	5
ACAGACT	9595	43.826347	20
GTCCCCA	9760	43.78589	14
CCCCACA	9725	43.596245	16