EGAF00005317981 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317981
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3596502
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	62

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	39067	1.0862499172807356	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	28000	0.7785342535608211	No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA	8725	0.24259683436850585	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8278	0.23016809110630276	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	6762	0.1880160222349383	No Hit
GGGGGGCCCTTCCCGTGGATCGCCCCAGCTGCGGCGGGCGTCGCGGCCGC	6759	0.1879326078506282	No Hit
GGGGGGCCACGGCAAGAAGGTGGCCGACGCGCTGACCAACGCCGTGGCGC	5362	0.14908930955689723	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5350	0.14875565201965688	No Hit
GGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	5324	0.1480327273556361	No Hit
GGGGGGCACCTTTGCCACACTGAGTGAGCTGCACTGTGACAAGCTGCACG	4937	0.13727227177963475	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4795	0.1333239909222906	No Hit
GGGGGTTAAGGGCCACGGCAAGAAGGTGGCCGACGCGCTGACCAACGCCG	4429	0.12314743603645988	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3928	0.10921723385667519	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	3794	0.10549139135749125	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGGGACT	6360	56.141384	1
ACTCTTC	7885	54.68826	5
GACTCTT	8115	53.262833	4
GGGACTC	7620	53.030277	2
GGACTCT	7885	52.924767	3
TCTTCTG	8465	50.941162	7
TTCTGGT	8405	50.939663	9
TCTGGTC	8390	50.909523	10
CTCTTCT	8540	50.692265	6
CGGGACT	1565	50.241474	1
GCGCGGT	3135	49.632435	9
TGGTCCC	8790	48.284294	12
CTGGTCC	8775	48.25094	11
GTCCCCA	9645	44.144627	14
CCGAACT	505	44.034245	67
CGCGGTG	3555	43.9594	10
ACAGACT	9730	43.615917	20
GTACGCA	470	43.18927	65
CCCCACA	9855	43.066357	16
CTACTCG	3825	42.874073	37