EGAF00005317986 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317986
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3846716
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	17275	0.44908436182967504	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	7857	0.20425214650626666	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4646	0.1207783470367971	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4315	0.11217360470593618	No Hit
CGTTTGAATATTTGCTACTACCACCAAGATCTGCACCTGCGGCGGCTCCACCCGGGCCCGCGCCCTAGGCTTCA	4170	0.10840415564861039	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	5080	36.50003	32
GCGGCAC	5255	35.2942	33
CGGCACC	5390	34.17038	34
CCGTCGC	5330	32.468407	45
TCGCCGG	5380	32.172146	48
CCCGTCG	5440	31.98456	44
GCACCCC	6020	30.857515	36
CCCCCGA	6225	29.854433	19
CACCCCC	6315	29.486343	37
ACCCGCG	6470	28.921837	25
AGGACCG	960	28.773783	70
GGCACCC	6565	28.122759	35
CCCCCGT	6280	27.730814	42
AGTCCGC	6765	27.661564	7
GTACGTA	325	27.592125	20
CAGTCCG	6690	27.147459	6
CGTACGT	320	26.937016	19
CCCCGAC	6965	26.789913	20
GTCCGCC	7095	26.42355	8
CGCCCTA	1805	26.408064	61