EGAF00005317997 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005317997
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3576372
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	24178	0.6760482410666452	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13992	0.39123446889753083	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	10179	0.2846180430894773	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6455	0.18049017272252438	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	4819	0.13474549068161812	No Hit
GGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	4089	0.11433374380517462	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3713	0.10382029609895167	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	6145	52.850163	9
CCGAACT	1135	51.664227	67
GCCGGTT	1195	50.535908	3
GGGGACT	5380	49.744335	1
TGGCGCG	6600	49.097305	15
CGCGGTG	6645	49.081226	10
GTCTACG	660	48.626045	4
TACGGCC	675	48.06209	7
TCTACGG	675	48.06209	5
CGGTTCA	1250	48.041637	5
TCTGGTC	5735	47.300716	10
ACTCTTC	5820	47.2029	5
GGACTCT	6065	46.941082	3
GGGACTC	6070	46.17757	2
CCGGTTC	1305	46.011738	4
TTCTGGT	6095	44.506905	9
CTGGTCC	6175	44.097973	11
CGGGACT	1375	43.28057	1
CTTAGGC	1420	42.781662	18
CTACTCG	7615	42.37667	37