EGAF00005318005 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318005
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3744140
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	8914	0.23807870432195377	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	7216	0.19272783603177232	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4714	0.12590341173139893	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	4575	50.44544	9
TGGCGCG	4860	47.771786	15
CGCGGTG	5120	45.278496	10
CTACTCG	5775	40.28955	37
TACTCGG	5770	40.211838	38
GCCGGTT	865	39.8809	3
GTAGTCC	6015	39.083714	27
TAGTCCC	6045	38.900173	28
CCGAACT	870	38.857006	67
TGTAGTC	6110	38.464176	26
CGGTTCA	900	38.330486	5
CGGTAAG	320	37.884003	1
CGTGCCT	6170	37.82049	20
ACTCGGG	6210	37.711967	39
GTGGCGC	6490	36.252033	14
CCTGTAG	6490	36.146683	24
CGAACTT	1005	35.796066	68
CGGGTAG	600	35.791363	1
GTCGTAC	185	35.42933	3
CGGCATA	365	35.111282	1