EGAF00005318063 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318063
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3159411
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	11693	0.3701006295160712	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	10288	0.3256303152707894	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7302	0.23111902819861044	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5906	0.18693357717625214	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4461	0.1411972041624214	No Hit
GGGGGGCCCTTCCCGTGGATCGCCCCAGCTGCGGCGGGCGTCGCGGCCGC	3810	0.12059209770428729	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	3473	0.1099255525792624	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3438	0.10881775115678208	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3168	0.10027185446907667	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	5525	52.195538	9
CCGAACT	980	50.51881	67
CGCGGTG	5755	50.350883	10
TGGCGCG	5880	49.515953	15
GTCTACG	575	48.59255	4
CGGTTCA	990	48.431965	5
TACGGCC	630	45.44541	7
GCCGGTT	1090	44.310043	3
TCTACGG	640	44.196346	5
CGAACTT	1225	42.301167	68
CCGGTTC	1145	42.176937	4
TAGTCCC	7115	41.559143	28
CCGACTC	875	41.39824	3
GTAGTCC	7170	41.181652	27
CTACTCG	7205	41.11544	37
GGCGCGT	7205	41.07962	16
TACTCGG	7170	40.796318	38
TGTAGTC	7320	40.61665	26
CGCGTGC	7335	40.27345	18
CCTGTAG	7390	40.21277	24