EGAF00005318067 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318067
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3230764
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	12287	0.3803125205059856	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	10790	0.33397673120042193	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7861	0.24331706060857433	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6171	0.1910074521073034	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4758	0.1472716670112704	No Hit
GGGGGGCCCTTCCCGTGGATCGCCCCAGCTGCGGCGGGCGTCGCGGCCGC	3870	0.1197859082248038	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3600	0.11142875183702677	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3492	0.10808588928191598	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	3432	0.10622874341796554	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	5620	53.46144	9
TACGGCC	575	52.79267	7
CCGAACT	955	52.23524	67
TGGCGCG	5930	51.061203	15
GTCTACG	625	50.765156	4
CGCGGTG	5950	50.612305	10
GCCGGTT	1010	49.169865	3
TCTACGG	630	48.172592	5
CTACGGC	670	45.30223	6
CGGTTCA	1120	44.648605	5
CGGCATA	225	44.60008	1
CCGGTTC	1140	43.260258	4
ACTCTTC	2760	42.85909	5
CTACTCG	7200	42.720566	37
TACTCGG	7250	42.540154	38
GTAGTCC	7320	42.306896	27
TGTAGTC	7355	42.283035	26
TAGTCCC	7325	42.10169	28
GGCGCGT	7390	42.049267	16
GGGGTAG	1350	41.780533	1