EGAF00005318069 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318069
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3193950
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	12291	0.38482130277556004	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	10628	0.3327541132453545	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7772	0.2433350553390003	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6032	0.188857057875045	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4540	0.1421437405094006	No Hit
GGGGGGCCCTTCCCGTGGATCGCCCCAGCTGCGGCGGGCGTCGCGGCCGC	3778	0.11828613472346156	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3602	0.11277571658917641	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3576	0.11196167754661157	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	3406	0.10663911457599523	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	5795	54.00493	9
CGCGGTG	6065	51.600754	10
TGGCGCG	6170	50.999844	15
TACGGCC	555	49.737434	7
CCGAACT	870	49.093674	67
TCTACGG	595	47.55284	5
GCCGGTT	900	46.77025	3
GTCTACG	605	46.19362	4
CGGTTCA	940	45.149906	5
CTACGGC	630	43.81631	6
CGAACTT	1010	43.787945	68
CCGGTTC	975	43.17254	4
GGCGCGT	7400	43.12898	16
GGGGACT	3760	42.946396	1
GTAGTCC	7420	42.765663	27
CTACTCG	7520	42.404106	37
TAGTCCC	7505	42.39007	28
TACTCGG	7555	42.361473	38
TGTAGTC	7545	42.27759	26
CGTGCCT	7560	42.108322	20