EGAF00005318070 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318070
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3138769
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	14846	0.4729879771337107	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	8373	0.2667606313175643	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	6974	0.22218901741415187	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	5818	0.18535929213013128	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	5004	0.15942555823636592	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	4634	0.14763749737556348	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	4630	0.14751005887977103	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	4474	0.14253995754386514	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4460	0.1420939228085915	No Hit
TGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	3961	0.1261959704584823	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	3867	0.1232011658073595	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	3691	0.11759387199249131	No Hit
AGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	3634	0.11577787342744879	No Hit
CGTTTGAATATTTGCTACTACCACCAAGATCTGCACCTGCGGCGGCTCCACCCGGGCCCGCGCCCTAGGCTTCA	3388	0.10794040593621257	No Hit
GCTCAGACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCG	3376	0.10755809044883519	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	4870	35.0828	32
GCGGCAC	5005	34.21824	33
CGGCACC	5205	32.712925	34
CCGTCGC	5085	31.189482	45
TCGCCGG	5150	30.997332	48
GCACCCC	5640	30.280373	36
TATCGGA	250	30.272743	8
AGGACCG	630	30.220633	70
GTTCCGT	300	29.91141	1
CCCGTCG	5185	29.893942	44
GTGCCGT	470	29.372906	1
GTTCTCG	1900	28.787617	13
CACCCCC	5975	28.53842	37
GGCACCC	6020	28.471725	35
GTTATCG	280	28.258287	6
CCCCCGA	6035	28.230515	19
TTATCGG	270	28.030766	7
GTAGCGT	605	27.860954	10
CTCGTTT	1995	27.761644	16
TCGTTTG	1955	27.63022	17