EGAF00005318075 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318075
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3217382
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	11462	0.3562523815947251	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	9608	0.29862789062660267	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8287	0.2575696637825412	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5498	0.17088427796264166	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	5069	0.15755045561888517	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4486	0.1394301329466007	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4121	0.12808550554457007	No Hit
GGGGGGCCCTTCCCGTGGATCGCCCCAGCTGCGGCGGGCGTCGCGGCCGC	3466	0.10772733856284394	No Hit
GGGGACTCTTCTGGTCCGCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	3378	0.10499219551797082	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3229	0.1003611010442652	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	5235	51.84307	9
CGGTTCA	935	51.497482	5
CCGAACT	970	50.708233	67
GCCGGTT	975	49.38476	3
TGGCGCG	5660	48.428154	15
TCTACGG	520	47.62102	5
CGCGGTG	5805	47.108067	10
GTCTACG	560	45.44784	4
CGAACTT	1140	44.85806	68
CCGGTTC	1090	44.489975	4
GGGGACT	3475	43.393517	1
TCTGGTC	3155	43.174393	10
TACGGCC	590	43.14298	7
GGACTCT	3510	43.11368	3
TGGTCCG	980	42.821724	12
ACTCTTC	3315	41.707302	5
CCGACTC	805	41.01521	3
GTAGTCC	6840	40.550518	27
TAGTCCC	6870	40.43755	28
CGGGACT	845	40.42748	1