EGAF00005318081 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318081
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3516700
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	17868	0.5080899707111781	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	11608	0.3300821793158359	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8895	0.25293599112804616	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6136	0.17448175846674438	No Hit
GGGGGGCCCTTCCCGTGGATCGCCCCAGCTGCGGCGGGCGTCGCGGCCGC	4923	0.13998919441521882	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4850	0.13791338470725395	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4245	0.12070975630562744	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	3799	0.1080274120624449	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCCGGTT	1045	52.74889	3
GCGCGGT	5440	51.864464	9
CCGAACT	1080	51.251976	67
TGGCGCG	5740	49.09376	15
CGGTTCA	1125	48.99786	5
CGCGGTG	5880	48.27639	10
CCGGTTC	1155	47.72519	4
TCTGGTC	4495	47.59341	10
GGGGACT	4690	47.298405	1
ACTCTTC	4590	47.061363	5
GGACTCT	4950	46.07469	3
TCTACGG	445	45.67743	5
CGAACTT	1280	44.880302	68
TTCTGGT	4760	44.79903	9
GGGACTC	5095	44.637733	2
CTGGTCC	5025	42.50505	11
CGGGACT	1005	42.420757	1
GTAGTCC	6870	41.325737	27
CTTAGGC	1350	40.848415	18
CTACTCG	6980	40.84061	37