EGAF00005318087 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318087
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4227964
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	26060	0.6163723248353108	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	24385	0.5767551473948218	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	21575	0.5102928974797326	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	19986	0.47270979601529245	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	10678	0.2525565496773388	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	7395	0.17490688189398018	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	5005	0.1183784913968047	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5005	0.1183784913968047	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	4820	0.11400286284367606	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	4349	0.10286274906787286	No Hit
GGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	4346	0.10279179292917347	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	4316	0.10208223154217963	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	5105	64.270035	4
TCTACGG	5175	63.33319	5
CTACGGC	5270	62.191513	6
TACGGCC	5305	61.849228	7
ACGGCCA	5685	57.836575	8
CGGCCAT	5715	57.35167	9
GGGTCTA	4330	57.105778	2
GCCATAC	5755	56.40558	11
CCATACC	5870	55.36395	12
CGTCTAC	1145	54.893494	3
CATACCA	6005	54.061783	13
GCGCGGT	9990	53.829357	9
CCTGGTT	8455	53.749214	70
GGCCATA	6190	53.062283	10
CCGAACT	1510	52.740143	67
GCGTCTA	1060	51.476162	2
CGCGGTG	10510	51.264645	10
TGGCGCG	10590	51.03501	15
TACCACC	6405	50.736477	15
CGAACTT	1620	50.431164	68