EGAF00005318093 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318093
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4231323
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	25193	0.5953929775628096	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	23169	0.5475592385643923	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	20876	0.49336814986707467	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	19398	0.45843817642850715	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	10618	0.2509380635796416	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	7222	0.1706794777898071	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4845	0.11450319439097417	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	4766	0.1126361660407395	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	4642	0.10970564052897876	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	4393	0.10382095623520113	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	5140	63.35862	5
GTCTACG	5190	62.805847	4
TACGGCC	5240	62.47827	7
CTACGGC	5305	61.322895	6
ACGGCCA	5605	58.5945	8
CGGCCAT	5710	57.39674	9
GCCATAC	5715	57.28609	11
CCATACC	5830	56.27057	12
GGGTCTA	4275	55.98275	2
CCTGGTT	8300	55.89271	70
CATACCA	6040	54.54284	13
GCGCGGT	10630	54.38502	9
GCCGGTT	1705	53.870712	3
GGCCATA	6165	53.3287	10
CCGAACT	1700	53.13643	67
TACCACC	6355	52.05542	15
CGCGGTG	11195	51.73281	10
GCGTCTA	1085	51.5635	2
TGGCGCG	11255	51.544197	15
CGTCTAC	1250	51.380505	3