EGAF00005318115 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318115
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4942348
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13752	0.278248314363942	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11378	0.23021446486568733	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7223	0.1461451115947319	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	5251	0.10624504790030974	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	7280	50.001007	9
CCGAACT	1250	46.770466	67
TGGCGCG	7835	46.53401	15
CGCGGTG	8050	45.218304	10
GCCGGTT	1405	43.209103	3
CGGTTCA	1445	42.013428	5
CTACTCG	9060	40.232944	37
TAGTCCC	9155	39.8806	28
CGAACTT	1535	39.751244	68
TACTCGG	9225	39.530636	38
CCGGTTC	1575	38.983276	4
TGTAGTC	9435	38.9362	26
CGTGCCT	9560	38.20138	20
GGCGCGT	9715	37.84967	16
GTAGTCC	9805	37.334255	27
GCGTGCC	9850	37.211945	19
CCTGTAG	9815	37.130474	24
ACTCGGG	9920	37.12109	39
CGCGTGC	10130	36.448193	18
GTGGCGC	10395	35.308758	14