FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005318117

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005318117
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4884232
Sequences flagged as poor quality0
Sequence length35-76
%GC57

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC137530.28157958098632496No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC111810.2289203297468261No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT71890.14718793046685744No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN51750.10595319796438826No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)