EGAF00005318123 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318123
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3736447
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	17546	0.46959049599793595	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	12922	0.34583656612819613	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	10097	0.27022998051357344	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5796	0.15512062662738157	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4628	0.12386098344229156	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4410	0.11802656373822512	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4069	0.10890024667819455	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	5680	51.304234	9
CCGAACT	1000	51.0738	67
GTCTACG	805	50.114685	4
TCTACGG	825	49.318386	5
TACGGCC	835	47.90892	7
TGGCGCG	6185	47.49732	15
GCCGGTT	1100	47.33248	3
CGGTTCA	1115	46.3871	5
CGCGGTG	6365	46.107967	10
GGGGACT	4475	44.91804	1
TCTGGTC	4010	43.860203	10
CTACGGC	925	43.244614	6
ACTCTTC	4190	42.957336	5
CGAACTT	1255	42.822723	68
CCGGTTC	1240	42.266563	4
GGACTCT	4605	41.63132	3
GCCATAC	990	41.104717	11
GGGACTC	4660	40.550194	2
CTACTCG	7460	39.980602	37
CTTAGGC	1295	39.955532	18