EGAF00005318127 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318127
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3446555
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	10371	0.30090916872065004	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	7682	0.2228892328716646	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6139	0.17811989073146955	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4625	0.13419196850188087	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3613	0.10482931506968553	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	3555	51.787403	9
TGGCGCG	3865	47.71873	15
CGCGGTG	3980	46.603836	10
CCGAACT	655	44.58684	67
GTACGCA	1095	43.926975	65
GCCGGTT	695	42.658398	3
AGTACGC	1220	40.53872	64
CTACTCG	4575	40.493217	37
TACTCGG	4585	40.268295	38
TACGCAC	1180	39.941574	66
CGGCATA	220	39.374043	1
GTAGTCC	4660	39.31195	27
TAGTCCC	4685	39.25717	28
CGGTTCA	750	39.072735	5
TGTAGTC	4725	39.05466	26
GTTGATC	1345	38.705894	10
ACTCGGG	4850	38.51318	39
CGAACTT	820	38.07608	68
ACGCACG	1165	37.907917	67
CGGGTAG	470	37.598022	1