EGAF00005318135 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318135
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4028030
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	61

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	23196	0.5758646286149806	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	16618	0.4125589928575507	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	12367	0.30702353259533816	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7101	0.17628965027569307	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	6100	0.15143879266043203	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	5059	0.12559489378182387	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	4842	0.12020764492816588	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4814	0.11951251604382292	No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA	4542	0.11275983545306267	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	4270	0.1060071548623024	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	7585	53.4797	9
GGGGACT	5255	52.700558	1
CCGAACT	1055	51.399307	67
CGCGGTG	8155	49.95372	10
ACTCTTC	6220	49.812984	5
TGGCGCG	8160	49.746788	15
TCTGGTC	6180	48.738953	10
CGGTTCA	1100	48.726357	5
GGACTCT	6555	48.47756	3
GGGACTC	6495	46.849117	2
TTCTGGT	6505	46.4102	9
GCCGGTT	1155	45.804417	3
CTGGTCC	6590	45.80191	11
TCTTCTG	6895	44.58759	7
CGGGACT	1415	44.44795	1
TCTACGG	455	44.079994	5
TGTAGTC	9435	43.67357	26
GTAGTCC	9380	43.642475	27
CGAACTT	1270	43.581463	68
CTCTTCT	7125	43.48586	6