FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005318143

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005318143
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3714888
Sequences flagged as poor quality0
Sequence length35-76
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA117270.31567573504234847No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN110060.29626734372610963No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC71580.1926841401409679No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC52000.13997730214208343No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)