EGAF00005318147 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318147
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3705565
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	11114	0.2999272715496827	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	10877	0.2935314857518354	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	6926	0.1869080693497483	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5329	0.1438107279186845	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	3585	48.06553	9
TGGCGCG	3925	44.688374	15
CGCGGTG	4045	42.85406	10
CGGGACT	1195	40.765163	1
CTACTCG	4295	40.601826	37
ACTCTTC	3915	40.42035	5
TCTGGTC	3795	40.340588	10
TACTCGG	4350	40.27522	38
GGACTCT	4425	38.78818	3
GGGGACT	4135	38.76863	1
CGGATAA	270	38.387997	1
GGGACTC	4245	38.330395	2
GTAGTCC	4570	38.116207	27
ACTCGGG	4660	38.069626	39
CGGCATA	210	37.8396	1
CGGCAAT	340	37.597656	1
CGGCAAA	765	37.03313	1
TAGTCCC	4725	36.820377	28
CGTGCCT	4730	36.773254	20
TGTAGTC	4815	36.72737	26