EGAF00005318152 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318152
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3540737
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	13826	0.39048367613861185	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	5854	0.16533281065495686	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	3591	0.10141956321522891	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	3576	0.1009959226002948	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	4255	35.303043	32
CGTACGT	265	35.27564	19
GCGGCAC	4380	34.3801	33
CGGCACC	4585	33.07933	34
TCGCCGG	4330	32.025795	48
CCGTCGC	4360	31.611866	45
CTACCGG	225	31.486275	70
GTACGTA	290	31.046028	20
CCCGTCG	4460	31.045036	44
TCTAGCG	420	30.566372	33
TACGTAG	310	30.16607	21
ACCCGCG	5275	29.30215	25
CCCCCGA	5205	29.267721	19
CGATCTA	310	29.20872	47
GCACCCC	5165	29.106653	36
GTTATCG	430	28.169062	6
CACCCCC	5365	28.091091	37
CCCCGAC	5575	27.640497	20
GGCACCC	5575	27.272434	35
AGTCCGC	5805	26.35074	7