EGAF00005318159 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318159
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3850194
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	61

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	10860	0.28206370899752065	No Hit
GGGGGGCCCTTCCCGTGGATCGCCCCAGCTGCGGCGGGCGTCGCGGCCGC	6277	0.16303074598318942	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	6149	0.15970623817916707	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	6025	0.15648562124402043	No Hit
GGGGACTCTTCTGGTCCGCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	5552	0.14420052599946911	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	5384	0.1398371095066898	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5072	0.13173362173438533	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	4012	0.1042025414823253	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGCGTA	90	55.261684	60
CGCGTAA	100	49.800533	61
GCGCGGT	3480	48.63741	9
ACTCTTC	4020	45.946594	5
TGGCGCG	3770	45.07879	15
CCGAACT	695	44.19721	67
TGGTCCG	1355	44.08779	12
TCTGGTC	4185	43.561962	10
GGGGACT	4615	42.869316	1
GGACTCT	4535	42.776752	3
GGGACTC	4475	42.12651	2
CGCGGTG	4035	41.94805	10
TTCTGGT	4455	40.76718	9
CGGGACT	870	40.40986	1
CTGGTCC	4530	40.319073	11
TACGGCC	455	39.990417	7
CGGTTCA	755	39.561195	5
CTACTCG	4425	38.733585	37
TCTACGG	470	37.98416	5
TACTCGG	4470	37.983246	38