EGAF00005318191 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318191
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3334569
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	11364	0.34079366778735126	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	6783	0.20341459420992639	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	5846	0.17531501072552405	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5740	0.1721361891146952	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3444	0.10328171346881711	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	3660	46.459312	9
TGGCGCG	3830	44.570805	15
CGGCATA	275	43.833443	1
CTACTCG	4415	39.226707	37
TACGGCC	430	39.066074	7
TCTACGG	440	38.95677	5
TACTCGG	4460	38.936028	38
GTCTACG	435	38.61646	4
CCGAACT	680	37.49156	67
CGCGGTG	4600	37.26356	10
GTAGTCC	4655	37.02107	27
TAGTCCC	4700	36.838917	28
ACTCGGG	4890	36.176796	39
GTACGCA	395	36.117134	65
TGTAGTC	4845	35.833214	26
GGGGTAT	1280	35.785896	1
GATCGCT	4760	35.501698	61
GCCGGTT	740	35.204792	3
AGGATCG	4810	35.12272	59
CGGGTAG	545	34.756527	1