EGAF00005318193 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318193
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3318853
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	11042	0.33270530511595425	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	6742	0.20314247120917978	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	5937	0.17888710346616737	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5733	0.17274040157849715	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3386	0.1020231989786833	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	3495	52.404953	9
TGGCGCG	3875	47.26517	15
CGGTATA	140	46.83848	1
CCGAACT	625	44.200317	67
CTACTCG	4170	44.088127	37
TACTCGG	4290	42.880444	38
CGCGGTG	4370	42.3044	10
GTAGTCC	4535	40.669178	27
TAGTCCC	4630	39.63662	28
GCCGGTT	700	39.20094	3
ACTCGGG	4780	38.87338	39
TGTAGTC	4845	38.263046	26
CGTGCCT	4815	38.173748	20
AGGATCG	4645	37.95205	59
CCTGTAG	4935	37.386997	24
GATCGCT	4800	37.111217	61
CGGTTCA	760	36.10613	5
GCTACTC	5130	36.08337	36
AGTCCCA	5110	35.93581	29
ATCGCTT	5060	35.384953	62