EGAF00005318202 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318202
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3300409
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	15578	0.47200210640560003	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	12916	0.3913454362777462	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	7346	0.22257847436484385	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	7185	0.21770029108513522	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	6058	0.18355300812717454	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	5906	0.1789475183227291	No Hit
GTGCGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCA	5395	0.1634645887827842	No Hit
GGGGGTACGGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGG	5134	0.15555647800015088	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	4803	0.14552741796547033	No Hit
GGGGCTGGGGGGAGGCCCAAGGGGCAAGAAGCATGGCCACCGAGGCTCCA	4698	0.14234599408739948	No Hit
TGTCCAGGGAGGCGTGCACCGCAGGGGTGAACTCGGCGGGGAGGTGGGCG	4643	0.14067953396079091	No Hit
GCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCTT	4643	0.14067953396079091	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4420	0.13392279562926898	No Hit
GCCGGTGCAAGGAGGGGAGGAGGGCCCGTTGGGAGGCCCAGCGGGCAGGAGGAACGGCTACCGAGGCTCCAGCTT	3993	0.12098500519178076	No Hit
GTCCAGGGAGGCGTGCACCGCAGGGGTGAACTCGGCGGGGAGGTGGGCGG	3836	0.1162280190121891	No Hit
GGGGTGAACTCGGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTG	3427	0.10383561552522733	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	5170	35.32346	32
CTTACCC	1455	33.961613	70
GCGGCAC	5355	33.915707	33
CGGCACC	5505	33.12707	34
CCGTCGC	5385	31.42438	45
CCCGTCG	5445	31.326708	44
TCGCCGG	5425	31.176151	48
CCCCCGA	6080	30.355173	19
ACCCGCG	6075	30.354586	25
GCACCCC	6075	30.148598	36
AGTCCGC	6325	29.603476	7
CCCCGAC	6270	29.439339	20
CAGTCCG	6160	29.27479	6
CGCCCTA	1385	29.193556	61
CACCCCC	6345	29.039858	37
GGCACCC	6340	28.771128	35
TCCGCCC	6580	28.718307	9
GTCCGCC	6650	28.416441	8
CCGCGCG	6735	27.234964	27
CCCGACC	7095	26.266136	21