EGAF00005318206 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318206
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3395226
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	29820	0.8782920488945359	No Hit
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	15591	0.45920359940693195	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	5881	0.17321380078969706	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	4870	0.1434366961138964	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4228	0.1245277928479577	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	4011	0.118136465731589	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	3467	0.1021139682601394	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	4650	0.0	37.38187	32
GCGGCAC	4840	0.0	35.876583	33
TCGCCGG	4700	0.0	35.412525	48
CCCGTCG	4850	0.0	34.72261	44
CCGTCGC	4875	0.0	34.305553	45
CGGCACC	5175	0.0	33.591198	34
TCGTATG	400	0.0	32.250824	40
TCGTATC	355	0.0	32.154243	33
CCCCCGA	5585	0.0	30.95796	19
ACCCGCG	5700	0.0	30.439087	25
CCCCCGT	5510	0.0	30.300528	42
GCACCCC	5935	0.0	29.30097	36
CCCCGAC	5885	0.0	29.231665	20
CCGCGCG	6020	0.0	28.940454	27
AATTCGT	445	0.0	28.665924	30
CGTATGC	500	0.0	28.612152	41
GCGCGGG	6055	0.0	28.469234	62
CGCGCTA	85	4.525389E-6	28.335285	28
CACCCCC	6140	0.0	28.300917	37
CGTCGCC	5970	0.0	27.987185	46