EGAF00005318212 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318212
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3359274
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	29288	0.8718550496327481	No Hit
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	15825	0.4710839306350122	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	5599	0.16667291801740494	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	4962	0.14771048744460857	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4324	0.12871828853496323	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	4032	0.12002593417506283	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	3475	0.10344497055018435	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGTATG	385	38.039738	40
CGCGGCA	4685	36.68243	32
GCGGCAC	4855	35.5714	33
TCGCCGG	4640	35.19178	48
CCCGTCG	4740	34.365437	44
CGGCACC	5030	34.298584	34
CCGTCGC	4770	33.899612	45
TATCTCG	420	33.06971	36
GAATTCG	445	32.52696	29
TCGTATC	415	32.524162	33
AATTCGT	475	31.96312	30
ACGAATT	470	31.45917	27
ACCCGCG	5435	31.38029	25
CCCCCGA	5520	30.826527	19
GCACCCC	5715	30.622028	36
CCGCGCG	5710	30.230425	27
CCCCGAC	5680	30.045822	20
TATGCCG	490	29.991394	43
CACCCCC	5825	29.841938	37
CGAATTC	485	29.809826	28