EGAF00005318214 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318214
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3451379
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	21329	0.6179848692363256	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	20862	0.6044540457596804	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	10641	0.3083115473554194	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	6469	0.187432327773913	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	5690	0.16486163936212161	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	5629	0.16309422987159625	No Hit
GTGCGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCA	5207	0.1508672330682895	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	5104	0.1478829186826483	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	5099	0.14773804905227736	No Hit
GGGGGTACGGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGG	4380	0.12690579620493722	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	4109	0.11905386223883266	No Hit
TGTCCAGGGAGGCGTGCACCGCAGGGGTGAACTCGGCGGGGAGGTGGGCG	3720	0.10778300499597407	No Hit
GGGGCTGGGGGGAGGCCCAAGGGGCAAGAAGCATGGCCACCGAGGCTCCA	3682	0.10668199580515499	No Hit
GCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCTT	3467	0.10045260169920488	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGTATG	260	42.85087	40
CGCGGCA	6215	37.00043	32
GCGGCAC	6420	35.582176	33
TCGCCGG	6315	34.176147	48
CGGCACC	6755	33.998375	34
CCCGTCG	6575	32.898823	44
CCGTCGC	6660	32.24832	45
ACCCGCG	7290	31.600122	25
CCCCCGA	7380	31.129404	19
GCACCCC	7430	31.097801	36
CCCCGAC	7425	30.871962	20
CACCCCC	7615	30.37422	37
CCGCGCG	7740	29.854616	27
TACGGGT	1710	29.575188	6
CCCCCGT	7325	29.141232	42
CGTATGC	410	28.900406	41
GGCACCC	8125	28.376146	35
AGTCCGC	8240	28.199642	7
CAGTCCG	8015	27.54171	6
CGTCCGT	300	27.431425	1