EGAF00005318217 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318217
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3437557
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	19890	0.5786085874357866	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	11121	0.32351463553913434	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	6401	0.18620782142667017	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	4414	0.128405143536529	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3486	0.10140922754153603	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	3315	47.62227	9
TGGCGCG	3635	43.42994	15
CGCCGTA	230	42.972668	53
CGGCATA	210	42.5697	1
CCGAACT	560	41.801823	67
GGGGACT	4000	40.5722	1
CTACTCG	3975	40.345913	37
TACTCGG	4005	40.159607	38
ACTCTTC	3970	40.025753	5
GGACTCT	4230	39.74676	3
TCTGGTC	3940	39.200703	10
ACTCGGG	4230	38.714985	39
GTAGTCC	4090	38.63601	27
AGGATCG	4015	38.15946	59
TGTAGTC	4215	37.86068	26
GGGACTC	4200	37.84438	2
TAGTCCC	4270	37.360107	28
CTGGTCC	4170	36.95661	11
GATCGCT	4190	36.562614	61
TTCTGGT	4305	36.432686	9