EGAF00005318221 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318221
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3426714
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	20067	0.5856047513740569	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	10285	0.30014176846973517	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	6098	0.17795474031389838	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	4209	0.12282904263384688	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	3460	46.429607	9
TGGCGCG	3780	42.679276	15
GGGGACT	3905	42.53943	1
CTACTCG	3820	42.35856	37
TCTGGTC	3590	42.272873	10
TACTCGG	3855	42.00594	38
ACTCTTC	3885	41.17508	5
GGACTCT	4200	40.201706	3
CCGAACT	575	40.07904	67
GTAGTCC	4180	39.1254	27
ACTCGGG	4245	39.08746	39
TAGTCCC	4195	38.848362	28
CTGGTCC	3945	38.208923	11
GGGACTC	4185	38.15075	2
AGGATCG	3965	37.97142	59
TTCTGGT	4035	37.69552	9
GATCGCT	4065	36.938114	61
TGTAGTC	4470	36.866264	26
CGGGACT	1095	36.509804	1
GGGGTAT	1215	36.30775	1