EGAF00005318235 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318235
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4142138
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	60

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	7116	0.1717953385425594	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	6137	0.1481602013259819	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5492	0.1325885327818629	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5378	0.12983633089964652	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4953	0.11957592914576966	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4841	0.11687201150710091	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCGAACT	770	46.001625	67
GCGCGGT	4345	45.916275	9
TGGCGCG	4430	44.873734	15
CGGTTCA	845	41.179855	5
GTTGATC	1195	40.94476	10
TCTACGG	485	40.49051	5
CGGGTAG	610	40.234596	1
CTACTCG	5110	39.89948	37
TACTCGG	5165	39.427616	38
GTAGTCC	5240	38.891994	27
CGCGGTG	5225	38.446793	10
TAGTCCC	5330	38.24687	28
CGGGTAT	380	38.206463	1
GTCTACG	505	38.204697	4
GCCGGTT	900	37.898613	3
TGTAGTC	5415	37.880154	26
GGGGTAG	1910	37.463478	1
CGGCAAT	370	37.370544	1
TACGGCC	535	36.71123	7
CGGCATA	245	36.684147	1