EGAF00005318241 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318241
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3699854
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	60

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	19200	0.5189393959869768	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13671	0.3695010667988521	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11016	0.2977414784475279	No Hit
GGGGACTCTTCTGGTCCGCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8206	0.22179253559735057	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6751	0.1824666594952125	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4284	0.11578835272959419	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	3886	0.10503117150028082	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3742	0.1011391260303785	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	5855	53.742153	9
GGGGACT	5510	51.158234	1
TCTACGG	730	51.04577	5
GTCTACG	735	50.229088	4
CGGGACT	1345	50.071495	1
ACTCTTC	6355	49.460865	5
TCTGGTC	6275	49.43028	10
CGCGGTG	6465	49.04493	10
TGGCGCG	6410	48.98065	15
GGACTCT	6595	48.70726	3
GGGACTC	6505	48.01508	2
CCGAACT	1005	47.860172	67
TTCTGGT	6610	47.133904	9
GCCGGTT	1045	46.554504	3
TGGTCCG	2220	46.157757	12
CGGTTCA	1065	45.68024	5
TACGGCC	830	45.31076	7
TCTTCTG	6965	45.128433	7
CTGGTCC	6930	45.05702	11
CTCTTCT	7170	44.03123	6