EGAF00005318243 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318243
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3713516
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	60

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	19259	0.5186190122783907	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13548	0.36482945004141626	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11329	0.3050747593385891	No Hit
GGGGACTCTTCTGGTCCGCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8222	0.22140742089168325	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6850	0.18446130298078695	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4110	0.11067678178847215	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	3914	0.10539876494405842	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3736	0.10060546393229489	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	6650	53.947296	9
TCTACGG	780	52.185673	5
CCGAACT	930	52.09978	67
GTCTACG	825	50.175438	4
GGGGACT	5405	50.15708	1
TACGGCC	815	49.94389	7
CGCGGTG	7245	49.564457	10
TGGCGCG	7255	49.353497	15
GCCGGTT	1015	49.280106	3
ACTCTTC	5975	49.188725	5
TCTGGTC	5980	48.512405	10
CGGTTCA	1055	47.738003	5
TTCTGGT	6175	47.25975	9
GGACTCT	6350	46.82775	3
TGGTCCG	1960	46.462852	12
GGGACTC	6330	46.431366	2
CTGGTCC	6395	45.472103	11
CTACGGC	910	45.109043	6
CGGGACT	1250	44.708775	1
TCTTCTG	6595	44.511555	7