EGAF00005318255 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318255
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3604121
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	60

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13282	0.36852258844805713	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11033	0.30612179779757676	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	9218	0.25576277821971016	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	6402	0.17762999632920204	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6344	0.17602072738401403	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	4923	0.13659363822690748	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	4540	0.12596691398540727	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	6375	51.641243	9
TGGCGCG	6755	48.680202	15
CCGAACT	1130	48.098988	67
CGGTTCA	1170	47.33827	5
TACGGCC	635	46.88296	7
CGCGGTG	7075	46.67865	10
GCCGGTT	1190	46.540733	3
CGAACTT	1270	45.186417	68
TCTACGG	690	43.144714	5
CTACGGC	690	43.144714	6
CGGTATA	115	42.33476	1
CTACTCG	7880	42.1307	37
TACTCGG	7910	41.93281	38
GTCTACG	725	41.539906	4
GTAGTCC	7955	41.494762	27
TGTAGTC	8020	41.191376	26
CCGGTTC	1345	41.17959	4
TAGTCCC	8050	41.100933	28
CGTGCCT	7975	40.95269	20
CCTGTAG	8160	40.38903	24