EGAF00005318256 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318256
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3583304
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	25873	0.7220431199808891	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	10426	0.29096052135124456	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	9561	0.26682078885855065	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	7924	0.22113669395619237	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	6413	0.1789689069082612	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	6276	0.1751456197967016	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	5875	0.1639548305139614	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	5814	0.1622524909971356	No Hit
TGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	4579	0.12778709258271137	No Hit
AGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	4063	0.11338697470267664	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	4043	0.11282883059879932	No Hit
GGGGGCAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	3929	0.10964740920669863	No Hit
GCCCCGAGAGAACCTCCCCCGGGCCCGACGGCGCGACCCGCCCGGGGCGC	3727	0.10401015375753773	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	3714	0.10364736009001749	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	7305	37.5452	32
GCGGCAC	7475	36.60613	33
TCGCCGG	7290	35.579773	48
CGGCACC	7685	35.475246	34
CCCGTCG	7385	35.12236	44
CCGTCGC	7490	34.545757	45
GCACCCC	8070	34.012756	36
CCCCCGA	8375	33.53999	19
TAGTCCG	450	33.084076	6
CACCCCC	8415	32.95554	37
ACCCGCG	8665	32.28375	25
GGCACCC	8580	31.780527	35
TTCCTCG	1035	31.110407	4
CCCCGAC	9120	30.878265	20
CGCTTCC	965	30.765831	1
GTACGGC	1030	27.899982	14
CCCGACC	10305	27.298456	21
CCGCGCG	10285	27.277937	27
AGTCCGC	10470	27.05015	7
GTGCCGT	545	26.917194	1