EGAF00005318257 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318257
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3583304
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	60

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13385	0.3735379415198934	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11197	0.31247697655571505	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	9155	0.2554904635498412	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6424	0.17927588616539372	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	6324	0.17648516564600714	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	4909	0.1369964702966871	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	4629	0.12918245284240468	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	6710	0.0	53.137897	9
TGGCGCG	7115	0.0	50.30709	15
CGCGTAA	50	6.1278115E-8	49.07942	61
CCGAACT	1030	0.0	48.700554	67
CGCGGTG	7460	0.0	47.93483	10
CGGTTCA	1065	0.0	47.784573	5
TCTACGG	390	0.0	46.15925	5
GCCGGTT	1140	0.0	44.337173	3
GTAGTCC	8395	0.0	43.365494	27
TAGTCCC	8385	0.0	43.263916	28
TGTAGTC	8415	0.0	43.25516	26
CTACTCG	8340	0.0	43.243347	37
CGTGCCT	8460	0.0	42.777718	20
TACTCGG	8455	0.0	42.62185	38
CCTGTAG	8615	0.0	42.23503	24
CGAACTT	1220	0.0	42.07912	68
CCGGTTC	1230	0.0	41.09299	4
ACTCGGG	8885	0.0	41.001995	39
TACGGCC	435	0.0	40.586037	7
AGTCCCA	9010	0.0	40.075397	29