EGAF00005318261 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318261
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3593624
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	60

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	12908	0.359191724008967	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	10702	0.2978052239188073	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8738	0.2431528729772508	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6151	0.17116426203743074	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	6103	0.1698285630327491	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	4801	0.13359772753076005	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	4395	0.12229994011616128	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	6380	52.04223	9
CCGAACT	1065	51.372364	67
TGGCGCG	6730	49.43104	15
CGGTTCA	1150	48.473473	5
CGCGGTG	7180	46.340096	10
CGAACTT	1255	44.875877	68
GCCGGTT	1235	44.850014	3
GTAGTCC	7750	43.350864	27
TAGTCCC	7775	43.309727	28
CTACTCG	7715	43.145905	37
TACGGCC	555	43.042946	7
TGTAGTC	7895	42.679283	26
TACTCGG	7830	42.519943	38
TCTACGG	555	42.422092	5
CGTGCCT	7960	42.16541	20
CCTGTAG	8080	41.69395	24
CGGGTAG	500	41.172924	1
CCGGTTC	1370	40.935867	4
ACTCGGG	8290	40.7158	39
AGTCCCA	8480	39.79977	29