EGAF00005318263 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318263
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3097981
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	62

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	34690	1.119761547924277	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	7888	0.2546174427796684	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7834	0.2528743720507001	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6289	0.20300318174966211	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4648	0.15003319904156934	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4243	0.13696016857430693	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4134	0.1334417480287968	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3843	0.124048533544912	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	3303	0.10661782625522881	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCGAACT	675	54.571983	67
CGGCATA	165	49.10205	1
GCGCGGT	4200	47.911503	9
GGGGTAG	1305	46.303604	1
TGGCGCG	4340	45.978188	15
TCTACGG	580	45.7574	5
CGGTTCA	760	45.08674	5
GTTGATC	970	45.02294	10
TACGGCC	600	44.232155	7
CGGTAAG	255	43.686382	1
GTCTACG	620	43.34715	4
AGTACGC	690	43.16731	64
TACTCGG	4855	43.01817	38
CTACTCG	4850	42.99357	37
CTACGGC	650	41.863342	6
GCCGGTT	810	41.47345	3
GTAGTCC	4975	41.335228	27
CGCGGTG	4905	41.299095	10
CTTAGGC	820	41.080296	18
TAGTCCC	5045	40.83747	28