EGAF00005318265 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318265
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3077960
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	62

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	33999	1.1045952514002781	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	8032	0.2609520591560644	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7570	0.24594211750640035	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6251	0.20308905898712135	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4745	0.15416054789535927	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4247	0.13798100040286423	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4143	0.13460213907913035	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3884	0.12618747482098533	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	3222	0.10467972293337145	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	455	51.705643	5
GCGCGGT	3930	49.25446	9
CCGAACT	720	47.528004	67
CGGTTCA	715	47.005127	5
TGGCGCG	4280	45.934063	15
AGTACGC	635	45.737335	64
GCCGGTT	740	44.50877	3
CGGGTAG	305	44.33319	1
TACGGCC	550	42.77256	7
GTTGATC	950	42.449566	10
GTAGTCC	4700	42.21649	27
AAGTACG	740	42.136066	63
CTACTCG	4720	42.09504	37
CGCGGTG	4635	42.0527	10
GGGGTAG	1155	41.852646	1
GTACGCA	590	41.8454	65
TAGTCCC	4725	41.70182	28
TGTAGTC	4755	41.444744	26
TACTCGG	4825	41.244663	38
GTCGTAC	165	40.737778	3