EGAF00005318269 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318269
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3064475
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	62

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	34071	1.111805447915222	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	7559	0.24666541577268536	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7135	0.23282944060565025	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6118	0.19964267941490793	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4507	0.1470725001835551	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4057	0.13238809257703196	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3912	0.12765645012604115	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3805	0.124164824317379	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	3178	0.10370454971895676	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	630	53.336147	5
GCGCGGT	4205	51.779385	9
TACGGCC	660	50.399334	7
CCGAACT	695	49.243385	67
CTACGGC	680	48.92023	6
TGGCGCG	4525	48.25898	15
CGCCGTA	275	48.21939	53
GTCTACG	730	46.942673	4
CGGTAAG	220	44.63078	1
CGCGGTG	4970	44.147354	10
GCCGGTT	715	43.69859	3
CGTATCA	315	43.569355	56
GCCGTAT	315	43.35544	54
CGGTATA	125	43.338028	1
GTTGATC	985	43.322685	10
CTACTCG	5115	43.147907	37
CGGTTCA	725	43.102962	5
TAGTCCC	5200	42.935642	28
GTAGTCC	5195	42.83364	27
TGTAGTC	5205	42.748096	26