EGAF00005318275 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318275
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3020994
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	9674	0.32022572702891827	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	7198	0.23826594822763636	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	5735	0.18983817908939904	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3884	0.12856695511477348	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3246	0.10744807834772263	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	4420	52.512726	9
TGGCGCG	4745	48.842255	15
CGCGGTG	4975	46.863117	10
CTACTCG	5615	41.61029	37
GTAGTCC	5655	41.529713	27
TGTAGTC	5680	41.339382	26
TACTCGG	5690	41.128304	38
CCGAACT	680	41.07322	67
TAGTCCC	5740	40.86387	28
CCTGTAG	5840	40.192795	24
GCCGGTT	680	40.187378	3
ACTCGGG	5955	39.83674	39
CGGGTAG	310	39.30316	1
CGAACTT	735	39.144768	68
CGGCAAT	330	39.030933	1
AGGATCG	5970	38.79807	59
CGGTATA	210	38.12674	1
CGGCAAA	615	37.924583	1
TCTACGG	265	37.85441	5
GATCGCT	6170	37.748184	61