EGAF00005318279 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318279
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3328062
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	60

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	13554	0.4072640473645022	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13147	0.3950347078870525	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	11267	0.3385453756570641	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	9335	0.2804935725356078	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5906	0.177460636250166	No Hit
GGGGGGCCCTTCCCGTGGATCGCCCCAGCTGCGGCGGGCGTCGCGGCCGC	4167	0.12520800393742665	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4009	0.12046049622873613	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3630	0.1090724872313076	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3622	0.10883210709415869	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	870	55.149467	5
CCGAACT	1095	54.084362	67
TACGGCC	895	53.22877	7
GTCTACG	900	52.933052	4
CTACGGC	900	52.933052	6
GCGCGGT	6110	52.40707	9
GCCGGTT	1135	50.0667	3
CGGTTCA	1175	48.942966	5
TGGCGCG	6600	48.308548	15
CGCGGTG	6720	47.751152	10
GTTGATC	1190	46.038414	10
AGTACGC	975	45.273643	64
GTACGCA	930	44.447407	65
GCCGAAC	1370	43.78024	66
CCGGTTC	1330	43.494938	4
AAGTACG	1030	43.454845	63
CTTAGGC	1320	43.36839	18
GGACTCT	3635	43.247986	3
ACTCTTC	3300	42.483936	5
GTAGTCC	7640	42.30795	27